Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 AL450487.1-201ENST00000426799 995 ntBASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 KRT17P6-201ENST00000453795 1220 ntBASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ABR-217ENST00000572441 563 ntTSL 4 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGHV4-28A0A0C4DH34 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 MINOS1P3-201ENST00000457048 203 ntBASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC099336.1-202ENST00000602961 463 ntBASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC138894.3-201ENST00000603787 634 ntBASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC12.99□□□□□ -0.33
IGHV4-28A0A0C4DH34 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms