Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 MIR4497-201ENST00000583208 89 ntBASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 AC010947.1-201ENST00000623454 693 ntBASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-2A0A0B4J237 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 AC012317.2-201ENST00000623305 2251 ntBASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV8-2A0A0B4J237 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-2A0A0B4J237 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
TRAV8-2A0A0B4J237 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-2A0A0B4J237 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-2A0A0B4J237 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-2A0A0B4J237 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-2A0A0B4J237 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-2A0A0B4J237 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
TRAV8-2A0A0B4J237 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-2A0A0B4J237 AC006116.8-202ENST00000587620 1550 ntBASIC13.71□□□□□ -0.22
TRAV8-2A0A0B4J237 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-2A0A0B4J237 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 AC009947.2-201ENST00000444014 672 ntBASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 SEC1P-202ENST00000473944 940 ntBASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV8-2A0A0B4J237 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms