Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 AC005363.2-201ENST00000618631 242 ntBASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRGV1A0A0A0MS02 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 AL137013.1-201ENST00000432946 1228 ntBASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 AC034232.1-201ENST00000506026 1064 ntBASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 AC138028.4-201ENST00000564984 1845 ntBASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.1□□□□□ -0.31
TRGV1A0A0A0MS02 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 MIR3917-201ENST00000580971 93 ntBASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms