Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV27A0A087WT01 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 PP12613-201ENST00000424958 2230 ntBASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 AC139713.2-201ENST00000641328 2723 ntBASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV27A0A087WT01 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.33■□□□□ 0.21
TRAV27A0A087WT01 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAV27A0A087WT01 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV27A0A087WT01 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAV27A0A087WT01 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV27A0A087WT01 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV27A0A087WT01 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV27A0A087WT01 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV27A0A087WT01 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV27A0A087WT01 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV27A0A087WT01 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAV27A0A087WT01 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV27A0A087WT01 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 HMGA1P5-201ENST00000412453 271 ntBASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 AC012313.1-201ENST00000593393 3059 ntBASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRAV27A0A087WT01 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRAV27A0A087WT01 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV27A0A087WT01 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV27A0A087WT01 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRAV27A0A087WT01 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV27A0A087WT01 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV27A0A087WT01 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV27A0A087WT01 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV27A0A087WT01 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV27A0A087WT01 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV27A0A087WT01 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms