Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 PRYP5-201ENST00000451909 266 ntBASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 AD001527.2-201ENST00000622994 785 ntBASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC2Q9Y5Z7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HCFC2Q9Y5Z7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HCFC2Q9Y5Z7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
HCFC2Q9Y5Z7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.77■□□□□ 0.59
HCFC2Q9Y5Z7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HCFC2Q9Y5Z7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 AC010460.3-201ENST00000511359 1579 ntBASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 SIGLEC16-201ENST00000599858 1437 ntBASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 AC096633.1-201ENST00000422446 749 ntBASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 AP006288.1-201ENST00000446065 395 ntBASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 KRT18P2-201ENST00000447938 1258 ntBASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 AC136632.2-201ENST00000512891 861 ntBASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC2Q9Y5Z7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 AC122714.2-201ENST00000502787 707 ntBASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 GMCL1P1-201ENST00000463439 1581 ntBASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HCFC2Q9Y5Z7 AC022898.2-201ENST00000616822 1312 ntBASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
HCFC2Q9Y5Z7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms