Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 AC009078.2-202ENST00000463353 338 ntBASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 RN7SL606P-201ENST00000472779 293 ntBASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 GUSBP12-201ENST00000513727 720 ntBASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 AC074051.2-201ENST00000565115 352 ntBASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 AC068587.9-201ENST00000641814 219 ntBASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA3Q9Y5H0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHGA3Q9Y5H0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGA3Q9Y5H0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PCDHGA3Q9Y5H0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA3Q9Y5H0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PCDHGA3Q9Y5H0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA3Q9Y5H0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA3Q9Y5H0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA3Q9Y5H0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA3Q9Y5H0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA3Q9Y5H0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGA3Q9Y5H0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 AC099398.1-201ENST00000567919 2776 ntBASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 WIZP1-201ENST00000531444 2299 ntBASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 AC106795.1-205ENST00000512851 1056 ntBASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 AL592071.1-201ENST00000611956 408 ntBASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 AC141586.3-201ENST00000562166 1838 ntBASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGA3Q9Y5H0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 IGHV3-47-201ENST00000425060 335 ntBASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 AC068880.1-201ENST00000507289 2297 ntBASIC17.5■□□□□ 0.39
PCDHGA3Q9Y5H0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms