Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 SLC25A24-204ENST00000569674 2357 ntBASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 MRPL3P1-201ENST00000400109 1033 ntBASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 FAM197Y8-203ENST00000450145 560 ntBASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 AC008608.2-201ENST00000606089 416 ntBASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTDP1Q9Y5B0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 AC106795.1-205ENST00000512851 1056 ntBASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CTDP1Q9Y5B0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 AL022342.1-201ENST00000400363 863 ntBASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 AF186996.4-201ENST00000467186 377 ntBASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTDP1Q9Y5B0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 AC112698.1-201ENST00000510299 916 ntBASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms