Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 AC093010.1-201ENST00000473625 1624 ntBASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 AC125634.1-201ENST00000438758 1403 ntBASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 AKR1C7P-201ENST00000305623 895 ntBASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 AC079781.3-201ENST00000449110 356 ntBASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 REXO1L6P-202ENST00000619970 1078 ntBASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00588Q9Y4M8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 AC004408.2-201ENST00000623613 2777 ntBASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 KRT8P10-201ENST00000450021 1447 ntBASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 SAPCD2P3-201ENST00000455031 850 ntBASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00588Q9Y4M8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 AL138781.2-201ENST00000617896 1843 ntBASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms