Protein–RNA interactions for Protein: Q9Y2V3

RAX, Retinal homeobox protein Rx, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAXQ9Y2V3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 AC073592.5-201ENST00000624854 528 ntBASIC16.59■□□□□ 0.25
RAXQ9Y2V3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAXQ9Y2V3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAXQ9Y2V3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAXQ9Y2V3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAXQ9Y2V3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAXQ9Y2V3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RAXQ9Y2V3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 AC141586.3-201ENST00000562166 1838 ntBASIC16.57■□□□□ 0.24
RAXQ9Y2V3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 TSPY16P-201ENST00000449843 468 ntBASIC16.57■□□□□ 0.24
RAXQ9Y2V3 AC067863.1-201ENST00000494933 530 ntBASIC16.57■□□□□ 0.24
RAXQ9Y2V3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 RN7SL204P-201ENST00000582831 262 ntBASIC16.57■□□□□ 0.24
RAXQ9Y2V3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.57■□□□□ 0.24
RAXQ9Y2V3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAXQ9Y2V3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAXQ9Y2V3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAXQ9Y2V3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAXQ9Y2V3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RAXQ9Y2V3 LINC01126-201ENST00000623515 1646 ntBASIC16.56■□□□□ 0.24
RAXQ9Y2V3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAXQ9Y2V3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAXQ9Y2V3 NCF1C-201ENST00000438382 1427 ntBASIC16.56■□□□□ 0.24
RAXQ9Y2V3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
RAXQ9Y2V3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAXQ9Y2V3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAXQ9Y2V3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAXQ9Y2V3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.56■□□□□ 0.24
RAXQ9Y2V3 AL020989.1-201ENST00000422979 469 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms