Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SHANK2Q9UPX8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 DDX43P3-201ENST00000441064 443 ntBASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 AL589182.2-201ENST00000619332 1049 ntBASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 FUT8-AS1-201ENST00000621019 1521 ntBASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 POR-209ENST00000439269 1858 ntTSL 2 BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 AC003669.1-201ENST00000334569 611 ntBASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 AC004967.1-201ENST00000453589 447 ntBASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 AC040169.1-201ENST00000565382 521 ntBASIC26.62■■□□□ 1.85
SHANK2Q9UPX8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SHANK2Q9UPX8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SHANK2Q9UPX8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SHANK2Q9UPX8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SHANK2Q9UPX8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC26.61■■□□□ 1.85
SHANK2Q9UPX8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC26.61■■□□□ 1.85
SHANK2Q9UPX8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SHANK2Q9UPX8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SHANK2Q9UPX8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SHANK2Q9UPX8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC26.61■■□□□ 1.85
SHANK2Q9UPX8 NCF1C-201ENST00000438382 1427 ntBASIC26.61■■□□□ 1.85
SHANK2Q9UPX8 SLC25A24-204ENST00000569674 2357 ntBASIC26.6■■□□□ 1.85
SHANK2Q9UPX8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC26.6■■□□□ 1.85
SHANK2Q9UPX8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SHANK2Q9UPX8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SHANK2Q9UPX8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SHANK2Q9UPX8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SHANK2Q9UPX8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC26.6■■□□□ 1.85
SHANK2Q9UPX8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SHANK2Q9UPX8 AC108751.1-201ENST00000490852 363 ntBASIC26.6■■□□□ 1.85
SHANK2Q9UPX8 MIR1199-201ENST00000621445 119 ntBASIC26.6■■□□□ 1.85
SHANK2Q9UPX8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC26.6■■□□□ 1.85
SHANK2Q9UPX8 PGM5P2-202ENST00000637225 1043 ntBASIC26.6■■□□□ 1.85
SHANK2Q9UPX8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC26.6■■□□□ 1.85
SHANK2Q9UPX8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 YBX2P1-201ENST00000394192 760 ntBASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 AL020989.1-201ENST00000422979 469 ntBASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 AC004832.2-201ENST00000426397 482 ntBASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 AC004706.3-202ENST00000621574 984 ntBASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
SHANK2Q9UPX8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 RPS8P6-201ENST00000426177 609 ntBASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 AC007967.2-201ENST00000432613 625 ntBASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 KRT18P3-201ENST00000451602 1288 ntBASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 AC100803.2-201ENST00000562459 1963 ntBASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SHANK2Q9UPX8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
SHANK2Q9UPX8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SHANK2Q9UPX8 SIRPAP1-201ENST00000448467 1770 ntBASIC26.58■■□□□ 1.84
SHANK2Q9UPX8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SHANK2Q9UPX8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
SHANK2Q9UPX8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SHANK2Q9UPX8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms