Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHGB4Q9UN71 NKILA-202ENST00000614771 2598 ntBASIC17.52■□□□□ 0.39
PCDHGB4Q9UN71 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGB4Q9UN71 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHGB4Q9UN71 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHGB4Q9UN71 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGB4Q9UN71 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 AL158047.1-201ENST00000445918 881 ntBASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 CA15P1-201ENST00000481698 905 ntBASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 AC008622.2-201ENST00000617006 1229 ntBASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGB4Q9UN71 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 AC034236.2-201ENST00000606662 1610 ntBASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 RPS2P55-201ENST00000397318 883 ntBASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 AL023284.2-201ENST00000405850 579 ntBASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 AL355355.2-201ENST00000442321 338 ntBASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 AC107956.1-201ENST00000494359 873 ntBASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 AC011270.2-201ENST00000624293 2550 ntBASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB4Q9UN71 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGB4Q9UN71 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB4Q9UN71 CICP6-201ENST00000457191 2729 ntBASIC17.49■□□□□ 0.39
PCDHGB4Q9UN71 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB4Q9UN71 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB4Q9UN71 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB4Q9UN71 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB4Q9UN71 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB4Q9UN71 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGB4Q9UN71 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms