Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 AC211429.1-201ENST00000415277 523 ntBASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 CCR12P-201ENST00000446203 998 ntBASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 TSPY17P-201ENST00000450329 467 ntBASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 AL023803.3-201ENST00000615559 522 ntBASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
VTI1BQ9UEU0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 MIR3180-5-201ENST00000583743 153 ntBASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 AC145285.6-201ENST00000604632 637 ntBASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 AC012306.2-201ENST00000609350 630 ntBASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 AC133561.5-201ENST00000635547 218 ntBASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 AC097493.4-201ENST00000641197 219 ntBASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 AC116562.4-202ENST00000641738 218 ntBASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 AC036111.1-201ENST00000533973 1582 ntBASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 PP12613-201ENST00000424958 2230 ntBASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTI1BQ9UEU0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 AC128688.1-201ENST00000487626 519 ntBASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 AL353719.1-201ENST00000566847 864 ntBASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 LINC01568-207ENST00000641790 1380 ntBASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTI1BQ9UEU0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms