Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL20A1Q9P218 AC100803.2-201ENST00000562459 1963 ntBASIC20.33■□□□□ 0.84
COL20A1Q9P218 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.33■□□□□ 0.84
COL20A1Q9P218 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.33■□□□□ 0.84
COL20A1Q9P218 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL20A1Q9P218 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL20A1Q9P218 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL20A1Q9P218 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.32■□□□□ 0.84
COL20A1Q9P218 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.32■□□□□ 0.84
COL20A1Q9P218 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.32■□□□□ 0.84
COL20A1Q9P218 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.32■□□□□ 0.84
COL20A1Q9P218 RNPS1P1-201ENST00000507437 918 ntBASIC20.32■□□□□ 0.84
COL20A1Q9P218 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.32■□□□□ 0.84
COL20A1Q9P218 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.32■□□□□ 0.84
COL20A1Q9P218 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.32■□□□□ 0.84
COL20A1Q9P218 AL773604.1-201ENST00000617417 272 ntBASIC20.32■□□□□ 0.84
COL20A1Q9P218 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.32■□□□□ 0.84
COL20A1Q9P218 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.32■□□□□ 0.84
COL20A1Q9P218 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
COL20A1Q9P218 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
COL20A1Q9P218 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
COL20A1Q9P218 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL20A1Q9P218 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL20A1Q9P218 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL20A1Q9P218 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.31■□□□□ 0.84
COL20A1Q9P218 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
COL20A1Q9P218 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
COL20A1Q9P218 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL20A1Q9P218 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL20A1Q9P218 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL20A1Q9P218 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL20A1Q9P218 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.31■□□□□ 0.84
COL20A1Q9P218 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL20A1Q9P218 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL20A1Q9P218 AL022342.1-201ENST00000400363 863 ntBASIC20.31■□□□□ 0.84
COL20A1Q9P218 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL20A1Q9P218 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.31■□□□□ 0.84
COL20A1Q9P218 AL031284.1-201ENST00000419297 478 ntBASIC20.31■□□□□ 0.84
COL20A1Q9P218 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL20A1Q9P218 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.31■□□□□ 0.84
COL20A1Q9P218 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.31■□□□□ 0.84
COL20A1Q9P218 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.31■□□□□ 0.84
COL20A1Q9P218 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.31■□□□□ 0.84
COL20A1Q9P218 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
COL20A1Q9P218 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.31■□□□□ 0.84
COL20A1Q9P218 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
COL20A1Q9P218 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.31■□□□□ 0.84
COL20A1Q9P218 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL20A1Q9P218 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
COL20A1Q9P218 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL20A1Q9P218 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL20A1Q9P218 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL20A1Q9P218 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL20A1Q9P218 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL20A1Q9P218 FAM220CP-201ENST00000395253 831 ntBASIC20.3■□□□□ 0.84
COL20A1Q9P218 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 AC021087.4-201ENST00000563761 564 ntBASIC20.3■□□□□ 0.84
COL20A1Q9P218 AP001005.1-201ENST00000571755 1248 ntBASIC20.3■□□□□ 0.84
COL20A1Q9P218 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 MIR7706-201ENST00000613747 67 ntBASIC20.3■□□□□ 0.84
COL20A1Q9P218 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL20A1Q9P218 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL20A1Q9P218 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL20A1Q9P218 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL20A1Q9P218 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 REXO1L9P-201ENST00000604264 2108 ntBASIC20.3■□□□□ 0.84
COL20A1Q9P218 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL20A1Q9P218 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.3■□□□□ 0.84
COL20A1Q9P218 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL20A1Q9P218 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.29■□□□□ 0.84
COL20A1Q9P218 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL20A1Q9P218 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.29■□□□□ 0.84
COL20A1Q9P218 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.29■□□□□ 0.84
COL20A1Q9P218 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms