Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 AC093484.2-201ENST00000580996 2166 ntBASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 TSEN15P1-201ENST00000423257 515 ntBASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 AC122714.2-201ENST00000502787 707 ntBASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 IGHV3-65-201ENST00000523210 341 ntBASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CXXC1Q9P0U4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 AC132938.6-201ENST00000623828 1655 ntBASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 IGLL3P-201ENST00000412472 434 ntBASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 AL096865.1-201ENST00000606796 927 ntBASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 AC073592.5-201ENST00000624854 528 ntBASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXXC1Q9P0U4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 KRT8P47-201ENST00000604727 1398 ntBASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 AC096633.1-201ENST00000422446 749 ntBASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 PRSS29P-201ENST00000440800 595 ntBASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CXXC1Q9P0U4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 AC008667.4-201ENST00000607370 168 ntBASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 AC093512.1-201ENST00000617969 520 ntBASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.22■□□□□ 0.67
CXXC1Q9P0U4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms