Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CUEDC1Q9NWM3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 Z83836.1-201ENST00000624605 1642 ntBASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CUEDC1Q9NWM3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 GPR32P1-201ENST00000601788 811 ntBASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 AL390719.2-201ENST00000606993 987 ntBASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CUEDC1Q9NWM3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms