Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.02■□□□□ -0
LIN7CQ9NUP9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.02■□□□□ -0
LIN7CQ9NUP9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.02■□□□□ -0
LIN7CQ9NUP9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 AL023284.2-201ENST00000405850 579 ntBASIC15.02■□□□□ -0
LIN7CQ9NUP9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.02■□□□□ -0
LIN7CQ9NUP9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.02■□□□□ -0
LIN7CQ9NUP9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.02■□□□□ -0
LIN7CQ9NUP9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.02■□□□□ -0
LIN7CQ9NUP9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.02■□□□□ -0
LIN7CQ9NUP9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.02■□□□□ -0
LIN7CQ9NUP9 LINC01023-201ENST00000606054 436 ntBASIC15.02■□□□□ -0
LIN7CQ9NUP9 AL023803.3-201ENST00000615559 522 ntBASIC15.02■□□□□ -0
LIN7CQ9NUP9 PHGDH-209ENST00000641074 1780 ntBASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LIN7CQ9NUP9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 AC092338.2-201ENST00000568827 1415 ntBASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 AC097493.4-201ENST00000641197 219 ntBASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIN7CQ9NUP9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15□□□□□ -0.01
LIN7CQ9NUP9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LIN7CQ9NUP9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15□□□□□ -0.01
LIN7CQ9NUP9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
LIN7CQ9NUP9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15□□□□□ -0.01
LIN7CQ9NUP9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15□□□□□ -0.01
LIN7CQ9NUP9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15□□□□□ -0.01
LIN7CQ9NUP9 AC007663.1-201ENST00000438948 1240 ntBASIC15□□□□□ -0.01
LIN7CQ9NUP9 GXYLT1P6-201ENST00000456472 1187 ntBASIC15□□□□□ -0.01
LIN7CQ9NUP9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15□□□□□ -0.01
LIN7CQ9NUP9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15□□□□□ -0.01
LIN7CQ9NUP9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LIN7CQ9NUP9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15□□□□□ -0.01
LIN7CQ9NUP9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 AC009102.3-201ENST00000623118 1491 ntBASIC15□□□□□ -0.01
LIN7CQ9NUP9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
LIN7CQ9NUP9 GPAT2P1-201ENST00000444924 1672 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms