Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 AC107918.4-201ENST00000641966 3141 ntBASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 REXO1L2P-201ENST00000425429 2069 ntBASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 AC023908.3-201ENST00000564211 3047 ntBASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC9.21□□□□□ -0.94
CDC42SE1Q9NRR8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms