Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TLR9Q9NR96 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TLR9Q9NR96 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TLR9Q9NR96 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.06■□□□□ 0.64
TLR9Q9NR96 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TLR9Q9NR96 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TLR9Q9NR96 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.06■□□□□ 0.64
TLR9Q9NR96 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TLR9Q9NR96 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TLR9Q9NR96 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TLR9Q9NR96 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR9Q9NR96 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR9Q9NR96 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR9Q9NR96 AC005332.7-201ENST00000614046 2005 ntBASIC19.05■□□□□ 0.64
TLR9Q9NR96 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR9Q9NR96 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR9Q9NR96 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.05■□□□□ 0.64
TLR9Q9NR96 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.05■□□□□ 0.64
TLR9Q9NR96 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR9Q9NR96 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR9Q9NR96 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR9Q9NR96 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.05■□□□□ 0.64
TLR9Q9NR96 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.05■□□□□ 0.64
TLR9Q9NR96 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR9Q9NR96 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.05■□□□□ 0.64
TLR9Q9NR96 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TLR9Q9NR96 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.05■□□□□ 0.64
TLR9Q9NR96 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR9Q9NR96 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.05■□□□□ 0.64
TLR9Q9NR96 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.05■□□□□ 0.64
TLR9Q9NR96 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TLR9Q9NR96 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TLR9Q9NR96 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TLR9Q9NR96 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR9Q9NR96 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR9Q9NR96 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR9Q9NR96 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR9Q9NR96 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
TLR9Q9NR96 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR9Q9NR96 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR9Q9NR96 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.04■□□□□ 0.64
TLR9Q9NR96 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR9Q9NR96 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.04■□□□□ 0.64
TLR9Q9NR96 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TLR9Q9NR96 AC004832.2-201ENST00000426397 482 ntBASIC19.04■□□□□ 0.64
TLR9Q9NR96 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.04■□□□□ 0.64
TLR9Q9NR96 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.04■□□□□ 0.64
TLR9Q9NR96 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.04■□□□□ 0.64
TLR9Q9NR96 AC002347.1-201ENST00000569543 541 ntBASIC19.04■□□□□ 0.64
TLR9Q9NR96 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TLR9Q9NR96 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.04■□□□□ 0.64
TLR9Q9NR96 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.04■□□□□ 0.64
TLR9Q9NR96 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR9Q9NR96 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.04■□□□□ 0.64
TLR9Q9NR96 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR9Q9NR96 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TLR9Q9NR96 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 AC007967.3-201ENST00000434308 558 ntBASIC19.03■□□□□ 0.64
TLR9Q9NR96 AC009947.1-201ENST00000444350 727 ntBASIC19.03■□□□□ 0.64
TLR9Q9NR96 BX005266.1-201ENST00000473402 457 ntBASIC19.03■□□□□ 0.64
TLR9Q9NR96 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TLR9Q9NR96 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TLR9Q9NR96 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
TLR9Q9NR96 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TLR9Q9NR96 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TLR9Q9NR96 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TLR9Q9NR96 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TLR9Q9NR96 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TLR9Q9NR96 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TLR9Q9NR96 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.02■□□□□ 0.64
TLR9Q9NR96 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms