Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 AP000997.3-201ENST00000623333 2250 ntBASIC21.23■□□□□ 0.99
RNF41Q9H4P4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF41Q9H4P4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 AL390961.4-201ENST00000623958 2535 ntBASIC21.21■□□□□ 0.99
RNF41Q9H4P4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 AP000867.3-201ENST00000524675 377 ntBASIC21.21■□□□□ 0.99
RNF41Q9H4P4 AC012615.1-201ENST00000565797 1299 ntBASIC21.21■□□□□ 0.99
RNF41Q9H4P4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 NEFHP1-201ENST00000412845 2629 ntBASIC21.21■□□□□ 0.99
RNF41Q9H4P4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF41Q9H4P4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RNF41Q9H4P4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 KRT17P6-201ENST00000453795 1220 ntBASIC21.2■□□□□ 0.98
RNF41Q9H4P4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms