Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB1BQ9H0U4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB1BQ9H0U4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 FDX1P1-201ENST00000449115 551 ntBASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB1BQ9H0U4 AC126763.1-201ENST00000552015 2118 ntBASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 ESPNP-201ENST00000270691 2015 ntBASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 AC079781.3-201ENST00000449110 356 ntBASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 AC112698.1-201ENST00000510299 916 ntBASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 AC005336.2-201ENST00000593183 939 ntBASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAB1BQ9H0U4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 AC073592.3-201ENST00000625118 1834 ntBASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 AC022898.2-201ENST00000616822 1312 ntBASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 RCN1P2-201ENST00000398357 915 ntBASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 AC104692.2-201ENST00000603054 253 ntBASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB1BQ9H0U4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAB1BQ9H0U4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RAB1BQ9H0U4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB1BQ9H0U4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB1BQ9H0U4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB1BQ9H0U4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
RAB1BQ9H0U4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB1BQ9H0U4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms