Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 AC063952.2-201ENST00000498792 1227 ntBASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 SLC25A1P2-201ENST00000430693 912 ntBASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 AC009065.1-201ENST00000564055 1225 ntBASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXP3Q9BZS1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 AC007663.1-201ENST00000438948 1240 ntBASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 AL138966.2-201ENST00000621997 464 ntBASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXP3Q9BZS1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms