Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 MYLKP1-201ENST00000509077 1580 ntBASIC12.57□□□□□ -0.4
UPK3BQ9BT76 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.57□□□□□ -0.4
UPK3BQ9BT76 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 TSSC2-201ENST00000450217 709 ntBASIC12.57□□□□□ -0.4
UPK3BQ9BT76 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 AP003733.1-201ENST00000491725 852 ntBASIC12.57□□□□□ -0.4
UPK3BQ9BT76 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
UPK3BQ9BT76 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 TNRC18P3-201ENST00000441896 2691 ntBASIC12.56□□□□□ -0.4
UPK3BQ9BT76 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 CHCHD2P8-201ENST00000429873 447 ntBASIC12.56□□□□□ -0.4
UPK3BQ9BT76 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 AC093458.2-201ENST00000623150 629 ntBASIC12.56□□□□□ -0.4
UPK3BQ9BT76 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 AC093503.3-201ENST00000624917 2352 ntBASIC12.56□□□□□ -0.4
UPK3BQ9BT76 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK3BQ9BT76 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms