Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12□□□□□ -0.49
LITAFQ99732 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12□□□□□ -0.49
LITAFQ99732 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
LITAFQ99732 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC11.99□□□□□ -0.49
LITAFQ99732 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11.99□□□□□ -0.49
LITAFQ99732 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.99□□□□□ -0.49
LITAFQ99732 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
LITAFQ99732 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
LITAFQ99732 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.99□□□□□ -0.49
LITAFQ99732 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
LITAFQ99732 HACD1-201ENST00000326961 773 ntTSL 2 BASIC11.99□□□□□ -0.49
LITAFQ99732 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC11.99□□□□□ -0.49
LITAFQ99732 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC11.99□□□□□ -0.49
LITAFQ99732 DUTP2-201ENST00000519164 463 ntBASIC11.99□□□□□ -0.49
LITAFQ99732 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
LITAFQ99732 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
LITAFQ99732 AC005837.3-201ENST00000612163 286 ntBASIC11.99□□□□□ -0.49
LITAFQ99732 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
LITAFQ99732 MAZ-216ENST00000616501 991 ntTSL 5 BASIC11.99□□□□□ -0.49
LITAFQ99732 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC11.99□□□□□ -0.49
LITAFQ99732 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC11.99□□□□□ -0.49
LITAFQ99732 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
LITAFQ99732 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
LITAFQ99732 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
LITAFQ99732 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
LITAFQ99732 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LITAFQ99732 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC11.98□□□□□ -0.49
LITAFQ99732 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.98□□□□□ -0.49
LITAFQ99732 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC11.98□□□□□ -0.49
LITAFQ99732 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.98□□□□□ -0.49
LITAFQ99732 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC11.98□□□□□ -0.49
LITAFQ99732 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC11.98□□□□□ -0.49
LITAFQ99732 BX276092.2-201ENST00000417668 665 ntBASIC11.98□□□□□ -0.49
LITAFQ99732 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC11.98□□□□□ -0.49
LITAFQ99732 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC11.98□□□□□ -0.49
LITAFQ99732 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC11.98□□□□□ -0.49
LITAFQ99732 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LITAFQ99732 AC133552.2-202ENST00000575694 574 ntBASIC11.98□□□□□ -0.49
LITAFQ99732 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC11.98□□□□□ -0.49
LITAFQ99732 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC11.98□□□□□ -0.49
LITAFQ99732 MARS-234ENST00000630571 216 ntTSL 5 BASIC11.98□□□□□ -0.49
LITAFQ99732 MARS-235ENST00000630803 183 ntTSL 3 BASIC11.98□□□□□ -0.49
LITAFQ99732 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LITAFQ99732 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.98□□□□□ -0.49
LITAFQ99732 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC11.98□□□□□ -0.49
LITAFQ99732 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LITAFQ99732 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC11.98□□□□□ -0.49
LITAFQ99732 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 CYP2T1P-202ENST00000641596 2535 ntBASIC11.98□□□□□ -0.49
LITAFQ99732 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC11.98□□□□□ -0.49
LITAFQ99732 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC11.98□□□□□ -0.49
LITAFQ99732 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LITAFQ99732 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LITAFQ99732 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC11.97□□□□□ -0.49
LITAFQ99732 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LITAFQ99732 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LITAFQ99732 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LITAFQ99732 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
LITAFQ99732 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LITAFQ99732 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LITAFQ99732 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LITAFQ99732 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC11.97□□□□□ -0.49
LITAFQ99732 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LITAFQ99732 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LITAFQ99732 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LITAFQ99732 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LITAFQ99732 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms