Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.28■□□□□ 0.04
CSMD1Q96PZ7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.28■□□□□ 0.04
CSMD1Q96PZ7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSMD1Q96PZ7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSMD1Q96PZ7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.28■□□□□ 0.04
CSMD1Q96PZ7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CSMD1Q96PZ7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.28■□□□□ 0.04
CSMD1Q96PZ7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.28■□□□□ 0.04
CSMD1Q96PZ7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.28■□□□□ 0.04
CSMD1Q96PZ7 OR7E47P-204ENST00000575924 449 ntBASIC15.28■□□□□ 0.04
CSMD1Q96PZ7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 AP000344.2-201ENST00000512987 629 ntBASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 AC104581.1-202ENST00000635932 2618 ntBASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSMD1Q96PZ7 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 AC092902.6-201ENST00000641783 218 ntBASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.27■□□□□ 0.03
CSMD1Q96PZ7 AC116562.4-201ENST00000641316 2276 ntBASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 DUX4L27-201ENST00000554796 1261 ntBASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 AL359881.2-201ENST00000602973 570 ntBASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 AC073592.5-201ENST00000624854 528 ntBASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.26■□□□□ 0.03
CSMD1Q96PZ7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 AL032819.2-201ENST00000624543 2162 ntBASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 PMS2P4-201ENST00000412466 1052 ntBASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 TERF1P3-201ENST00000505638 1227 ntBASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 AC091812.2-201ENST00000619081 385 ntBASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 FP475955.4-201ENST00000623131 1990 ntBASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms