Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NEK1Q96PY6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NEK1Q96PY6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NEK1Q96PY6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NEK1Q96PY6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NEK1Q96PY6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NEK1Q96PY6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NEK1Q96PY6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEK1Q96PY6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NEK1Q96PY6 AC022898.2-201ENST00000616822 1312 ntBASIC21.35■■□□□ 1.01
NEK1Q96PY6 GNAS-203ENST00000306120 1878 ntBASIC21.35■■□□□ 1.01
NEK1Q96PY6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
NEK1Q96PY6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEK1Q96PY6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEK1Q96PY6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NEK1Q96PY6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEK1Q96PY6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEK1Q96PY6 AP003733.1-201ENST00000491725 852 ntBASIC21.35■■□□□ 1.01
NEK1Q96PY6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEK1Q96PY6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.35■■□□□ 1.01
NEK1Q96PY6 AC083849.1-201ENST00000615227 514 ntBASIC21.35■■□□□ 1.01
NEK1Q96PY6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.35■■□□□ 1.01
NEK1Q96PY6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEK1Q96PY6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEK1Q96PY6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEK1Q96PY6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
NEK1Q96PY6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
NEK1Q96PY6 AC006116.8-202ENST00000587620 1550 ntBASIC21.35■■□□□ 1.01
NEK1Q96PY6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEK1Q96PY6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NEK1Q96PY6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
NEK1Q96PY6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
NEK1Q96PY6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
NEK1Q96PY6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NEK1Q96PY6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NEK1Q96PY6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NEK1Q96PY6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NEK1Q96PY6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.34■■□□□ 1.01
NEK1Q96PY6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NEK1Q96PY6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NEK1Q96PY6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NEK1Q96PY6 IGHGP-201ENST00000390555 1178 ntBASIC21.34■■□□□ 1.01
NEK1Q96PY6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NEK1Q96PY6 KRT18P65-201ENST00000439811 1286 ntBASIC21.34■■□□□ 1.01
NEK1Q96PY6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.34■■□□□ 1.01
NEK1Q96PY6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.34■■□□□ 1.01
NEK1Q96PY6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.34■■□□□ 1.01
NEK1Q96PY6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.34■■□□□ 1.01
NEK1Q96PY6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NEK1Q96PY6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NEK1Q96PY6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.34■■□□□ 1.01
NEK1Q96PY6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NEK1Q96PY6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NEK1Q96PY6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NEK1Q96PY6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NEK1Q96PY6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NEK1Q96PY6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NEK1Q96PY6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 LINC01238-205ENST00000567549 1107 ntBASIC21.33■■□□□ 1.01
NEK1Q96PY6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
NEK1Q96PY6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
NEK1Q96PY6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.33■■□□□ 1
NEK1Q96PY6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
NEK1Q96PY6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
NEK1Q96PY6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
NEK1Q96PY6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
NEK1Q96PY6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NEK1Q96PY6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.32■■□□□ 1
NEK1Q96PY6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.32■■□□□ 1
NEK1Q96PY6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
NEK1Q96PY6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NEK1Q96PY6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms