Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.33□□□□□ -0.28
ODF3Q96PU9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.33□□□□□ -0.28
ODF3Q96PU9 AL138966.2-201ENST00000621997 464 ntBASIC13.33□□□□□ -0.28
ODF3Q96PU9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ODF3Q96PU9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ODF3Q96PU9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ODF3Q96PU9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.33□□□□□ -0.28
ODF3Q96PU9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ODF3Q96PU9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ODF3Q96PU9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ODF3Q96PU9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.33□□□□□ -0.28
ODF3Q96PU9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ODF3Q96PU9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ODF3Q96PU9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ODF3Q96PU9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ODF3Q96PU9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ODF3Q96PU9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ODF3Q96PU9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.33□□□□□ -0.28
ODF3Q96PU9 AC099343.3-201ENST00000605834 2503 ntBASIC13.33□□□□□ -0.28
ODF3Q96PU9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 AC024563.2-201ENST00000603282 481 ntBASIC13.32□□□□□ -0.28
ODF3Q96PU9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
ODF3Q96PU9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF3Q96PU9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 DDX43P3-201ENST00000441064 443 ntBASIC13.31□□□□□ -0.28
ODF3Q96PU9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.31□□□□□ -0.28
ODF3Q96PU9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms