Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 GUSBP12-201ENST00000513727 720 ntBASIC14.99□□□□□ -0.01
GAFA1Q96PS6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 AL592071.1-201ENST00000611956 408 ntBASIC14.99□□□□□ -0.01
GAFA1Q96PS6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GAFA1Q96PS6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 AC016734.2-201ENST00000624325 1377 ntBASIC14.98□□□□□ -0.01
GAFA1Q96PS6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.98□□□□□ -0.01
GAFA1Q96PS6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 CHCHD2P8-201ENST00000429873 447 ntBASIC14.98□□□□□ -0.01
GAFA1Q96PS6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 AC068472.1-201ENST00000474589 881 ntBASIC14.98□□□□□ -0.01
GAFA1Q96PS6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 AC090616.6-201ENST00000582640 721 ntBASIC14.98□□□□□ -0.01
GAFA1Q96PS6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 IGHV3-41-201ENST00000613121 348 ntBASIC14.98□□□□□ -0.01
GAFA1Q96PS6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GAFA1Q96PS6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 KRT18P55-202ENST00000578578 1546 ntBASIC14.97□□□□□ -0.01
GAFA1Q96PS6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 AC100803.2-201ENST00000562459 1963 ntBASIC14.97□□□□□ -0.01
GAFA1Q96PS6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms