Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 AC134043.2-201ENST00000624206 2238 ntBASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 AC092647.4-201ENST00000457211 535 ntBASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MS4A4EQ96PG1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
MS4A4EQ96PG1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.83■□□□□ 0.29
MS4A4EQ96PG1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MS4A4EQ96PG1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 KRT18P48-201ENST00000434763 852 ntBASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 AL359075.1-203ENST00000462729 1002 ntBASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A4EQ96PG1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms