Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.56■□□□□ 0.56
RPRD1AQ96P16 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 AC233702.3-201ENST00000578656 1387 ntBASIC18.55■□□□□ 0.56
RPRD1AQ96P16 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 Z69720.1-201ENST00000601483 472 ntBASIC18.55■□□□□ 0.56
RPRD1AQ96P16 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 BICD1-207ENST00000551848 1962 ntBASIC18.55■□□□□ 0.56
RPRD1AQ96P16 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPRD1AQ96P16 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 AL845331.1-201ENST00000424978 1190 ntBASIC18.54■□□□□ 0.56
RPRD1AQ96P16 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 MIR3652-201ENST00000579335 131 ntBASIC18.54■□□□□ 0.56
RPRD1AQ96P16 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.54■□□□□ 0.56
RPRD1AQ96P16 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms