Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF558Q96NG5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF558Q96NG5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF558Q96NG5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
ZNF558Q96NG5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
ZNF558Q96NG5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF558Q96NG5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF558Q96NG5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.08■□□□□ 0.65
ZNF558Q96NG5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.08■□□□□ 0.65
ZNF558Q96NG5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF558Q96NG5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.08■□□□□ 0.64
ZNF558Q96NG5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.08■□□□□ 0.64
ZNF558Q96NG5 UPF3AP3-201ENST00000420996 769 ntBASIC19.08■□□□□ 0.64
ZNF558Q96NG5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.08■□□□□ 0.64
ZNF558Q96NG5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.08■□□□□ 0.64
ZNF558Q96NG5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.08■□□□□ 0.64
ZNF558Q96NG5 RNA5SP416-201ENST00000516838 111 ntBASIC19.08■□□□□ 0.64
ZNF558Q96NG5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.08■□□□□ 0.64
ZNF558Q96NG5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.08■□□□□ 0.64
ZNF558Q96NG5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ZNF558Q96NG5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ZNF558Q96NG5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF558Q96NG5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF558Q96NG5 AC120498.9-201ENST00000339021 3867 ntBASIC19.08■□□□□ 0.64
ZNF558Q96NG5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF558Q96NG5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 AC040169.1-201ENST00000565382 521 ntBASIC19.07■□□□□ 0.64
ZNF558Q96NG5 AC010327.4-202ENST00000591484 748 ntBASIC19.07■□□□□ 0.64
ZNF558Q96NG5 MIR1199-201ENST00000621445 119 ntBASIC19.07■□□□□ 0.64
ZNF558Q96NG5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF558Q96NG5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 AC010460.3-201ENST00000511359 1579 ntBASIC19.06■□□□□ 0.64
ZNF558Q96NG5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 AC006557.2-201ENST00000592985 1240 ntBASIC19.06■□□□□ 0.64
ZNF558Q96NG5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 AC073592.4-201ENST00000623827 446 ntBASIC19.06■□□□□ 0.64
ZNF558Q96NG5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF558Q96NG5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 AC007967.2-201ENST00000432613 625 ntBASIC19.05■□□□□ 0.64
ZNF558Q96NG5 DNAJB3-201ENST00000446806 729 ntBASIC19.05■□□□□ 0.64
ZNF558Q96NG5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 MIR3687-2-201ENST00000577708 61 ntBASIC19.05■□□□□ 0.64
ZNF558Q96NG5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.05■□□□□ 0.64
ZNF558Q96NG5 MIR3687-1-201ENST00000614492 61 ntBASIC19.05■□□□□ 0.64
ZNF558Q96NG5 AC055717.3-201ENST00000622967 595 ntBASIC19.05■□□□□ 0.64
ZNF558Q96NG5 AD001527.2-201ENST00000622994 785 ntBASIC19.05■□□□□ 0.64
ZNF558Q96NG5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms