Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF4Q96M43 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.63■■□□□ 1.37
NBPF4Q96M43 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF4Q96M43 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
NBPF4Q96M43 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.62■■□□□ 1.37
NBPF4Q96M43 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 SIGLEC16-201ENST00000599858 1437 ntBASIC23.62■■□□□ 1.37
NBPF4Q96M43 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.62■■□□□ 1.37
NBPF4Q96M43 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
NBPF4Q96M43 GPX1P2-201ENST00000429271 606 ntBASIC23.62■■□□□ 1.37
NBPF4Q96M43 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC23.62■■□□□ 1.37
NBPF4Q96M43 PRYP5-201ENST00000451909 266 ntBASIC23.62■■□□□ 1.37
NBPF4Q96M43 AC112482.1-201ENST00000492080 688 ntBASIC23.62■■□□□ 1.37
NBPF4Q96M43 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC23.62■■□□□ 1.37
NBPF4Q96M43 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC23.62■■□□□ 1.37
NBPF4Q96M43 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC23.62■■□□□ 1.37
NBPF4Q96M43 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF4Q96M43 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
NBPF4Q96M43 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NBPF4Q96M43 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC23.61■■□□□ 1.37
NBPF4Q96M43 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NBPF4Q96M43 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NBPF4Q96M43 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NBPF4Q96M43 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NBPF4Q96M43 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
NBPF4Q96M43 SPDYE21P-201ENST00000413323 827 ntBASIC23.61■■□□□ 1.37
NBPF4Q96M43 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC23.61■■□□□ 1.37
NBPF4Q96M43 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC23.61■■□□□ 1.37
NBPF4Q96M43 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
NBPF4Q96M43 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
NBPF4Q96M43 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
NBPF4Q96M43 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NBPF4Q96M43 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NBPF4Q96M43 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NBPF4Q96M43 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.6■■□□□ 1.37
NBPF4Q96M43 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
NBPF4Q96M43 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NBPF4Q96M43 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC23.6■■□□□ 1.37
NBPF4Q96M43 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NBPF4Q96M43 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC23.6■■□□□ 1.37
NBPF4Q96M43 PON3-205ENST00000451904 1053 ntTSL 3 BASIC23.6■■□□□ 1.37
NBPF4Q96M43 HS6ST1P1-201ENST00000481504 1234 ntBASIC23.6■■□□□ 1.37
NBPF4Q96M43 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC23.6■■□□□ 1.37
NBPF4Q96M43 DUTP2-201ENST00000519164 463 ntBASIC23.6■■□□□ 1.37
NBPF4Q96M43 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
NBPF4Q96M43 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.6■■□□□ 1.37
NBPF4Q96M43 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NBPF4Q96M43 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.6■■□□□ 1.37
NBPF4Q96M43 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NBPF4Q96M43 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC23.6■■□□□ 1.37
NBPF4Q96M43 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
NBPF4Q96M43 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NBPF4Q96M43 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NBPF4Q96M43 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NBPF4Q96M43 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NBPF4Q96M43 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NBPF4Q96M43 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NBPF4Q96M43 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
NBPF4Q96M43 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
NBPF4Q96M43 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NBPF4Q96M43 COX5BP2-201ENST00000392354 334 ntBASIC23.59■■□□□ 1.37
NBPF4Q96M43 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NBPF4Q96M43 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NBPF4Q96M43 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
NBPF4Q96M43 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
NBPF4Q96M43 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NBPF4Q96M43 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.58■■□□□ 1.37
NBPF4Q96M43 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
NBPF4Q96M43 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NBPF4Q96M43 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.58■■□□□ 1.37
NBPF4Q96M43 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms