Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 AL031284.1-201ENST00000419297 478 ntBASIC20.96■□□□□ 0.95
CCDC17Q96LX7 RNPS1P1-201ENST00000507437 918 ntBASIC20.96■□□□□ 0.95
CCDC17Q96LX7 AC073648.2-201ENST00000510116 352 ntBASIC20.96■□□□□ 0.95
CCDC17Q96LX7 AC079776.4-201ENST00000511039 504 ntBASIC20.96■□□□□ 0.95
CCDC17Q96LX7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 AP000867.4-201ENST00000641616 219 ntBASIC20.96■□□□□ 0.95
CCDC17Q96LX7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC17Q96LX7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC17Q96LX7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 AC010460.3-201ENST00000511359 1579 ntBASIC20.95■□□□□ 0.94
CCDC17Q96LX7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC17Q96LX7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 AC135776.1-201ENST00000319817 2481 ntBASIC20.94■□□□□ 0.94
CCDC17Q96LX7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 COX5BP2-201ENST00000392354 334 ntBASIC20.94■□□□□ 0.94
CCDC17Q96LX7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 BX640515.1-201ENST00000617215 977 ntBASIC20.94■□□□□ 0.94
CCDC17Q96LX7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC17Q96LX7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms