Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 POU5F1P3-201ENST00000428824 1078 ntBASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 UNC93B4-201ENST00000505679 747 ntBASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 AL391005.1-201ENST00000623953 2435 ntBASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 PRKY-204ENST00000533551 1019 ntBASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 AC106886.4-201ENST00000623557 2502 ntBASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP6Q96FZ7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 AL121829.2-201ENST00000620908 328 ntBASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP6Q96FZ7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 AGGF1P2-201ENST00000426656 2106 ntBASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 UNC93B5-201ENST00000530315 699 ntBASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP6Q96FZ7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms