Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 AC243591.1-201ENST00000452967 1364 ntBASIC18.04■□□□□ 0.48
SIPA1Q96FS4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIPA1Q96FS4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 AL049840.3-201ENST00000602669 611 ntBASIC18.03■□□□□ 0.48
SIPA1Q96FS4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.03■□□□□ 0.48
SIPA1Q96FS4 AC117500.6-201ENST00000624871 588 ntBASIC18.03■□□□□ 0.48
SIPA1Q96FS4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.03■□□□□ 0.48
SIPA1Q96FS4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 AC006538.3-201ENST00000612495 578 ntBASIC18.02■□□□□ 0.48
SIPA1Q96FS4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 MIR7706-201ENST00000613747 67 ntBASIC18.02■□□□□ 0.48
SIPA1Q96FS4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.02■□□□□ 0.48
SIPA1Q96FS4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SIPA1Q96FS4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.02■□□□□ 0.47
SIPA1Q96FS4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.02■□□□□ 0.47
SIPA1Q96FS4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIPA1Q96FS4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
SIPA1Q96FS4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SIPA1Q96FS4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIPA1Q96FS4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIPA1Q96FS4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SIPA1Q96FS4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SIPA1Q96FS4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
SIPA1Q96FS4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIPA1Q96FS4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.02■□□□□ 0.47
SIPA1Q96FS4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 HCG11-201ENST00000411553 5696 ntBASIC18.01■□□□□ 0.47
SIPA1Q96FS4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 HNRNPDP1-201ENST00000439535 754 ntBASIC18.01■□□□□ 0.47
SIPA1Q96FS4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 ESPNP-201ENST00000270691 2015 ntBASIC18.01■□□□□ 0.47
SIPA1Q96FS4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIPA1Q96FS4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms