Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.99■□□□□ 0.95
CDCA5Q96FF9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 BCRP1-201ENST00000444246 691 ntBASIC20.98■□□□□ 0.95
CDCA5Q96FF9 PDPK2P-202ENST00000562415 1191 ntBASIC20.98■□□□□ 0.95
CDCA5Q96FF9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CDCA5Q96FF9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 AC103564.2-201ENST00000432853 1299 ntBASIC20.97■□□□□ 0.95
CDCA5Q96FF9 AC244107.1-201ENST00000442033 332 ntBASIC20.97■□□□□ 0.95
CDCA5Q96FF9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDCA5Q96FF9 AC005082.1-201ENST00000413042 2259 ntBASIC20.97■□□□□ 0.95
CDCA5Q96FF9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 NCF1C-201ENST00000438382 1427 ntBASIC20.96■□□□□ 0.95
CDCA5Q96FF9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.96■□□□□ 0.95
CDCA5Q96FF9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 AL096865.1-201ENST00000606796 927 ntBASIC20.96■□□□□ 0.95
CDCA5Q96FF9 AC004877.2-201ENST00000623941 599 ntBASIC20.96■□□□□ 0.95
CDCA5Q96FF9 AC010507.1-201ENST00000633895 436 ntBASIC20.96■□□□□ 0.95
CDCA5Q96FF9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.96■□□□□ 0.95
CDCA5Q96FF9 AC148477.5-201ENST00000625164 1645 ntBASIC20.96■□□□□ 0.95
CDCA5Q96FF9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDCA5Q96FF9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDCA5Q96FF9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CDCA5Q96FF9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.95■□□□□ 0.94
CDCA5Q96FF9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.95■□□□□ 0.94
CDCA5Q96FF9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDCA5Q96FF9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDCA5Q96FF9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDCA5Q96FF9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDCA5Q96FF9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms