Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC97Q96F63 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC97Q96F63 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC97Q96F63 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC97Q96F63 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC97Q96F63 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC97Q96F63 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC97Q96F63 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
CCDC97Q96F63 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC97Q96F63 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC97Q96F63 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC97Q96F63 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCDC97Q96F63 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC97Q96F63 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
CCDC97Q96F63 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC97Q96F63 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC97Q96F63 KRT8P50-201ENST00000562022 1438 ntBASIC18.4■□□□□ 0.54
CCDC97Q96F63 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.4■□□□□ 0.54
CCDC97Q96F63 AL023973.1-201ENST00000624619 620 ntBASIC18.4■□□□□ 0.54
CCDC97Q96F63 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC97Q96F63 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC97Q96F63 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC97Q96F63 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CCDC97Q96F63 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CCDC97Q96F63 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC97Q96F63 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC97Q96F63 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC97Q96F63 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC97Q96F63 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC97Q96F63 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CCDC97Q96F63 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 AL450487.1-201ENST00000426799 995 ntBASIC18.39■□□□□ 0.53
CCDC97Q96F63 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC97Q96F63 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC97Q96F63 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC97Q96F63 FAM86EP-206ENST00000510506 987 ntBASIC18.39■□□□□ 0.53
CCDC97Q96F63 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC97Q96F63 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC97Q96F63 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC97Q96F63 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC97Q96F63 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC97Q96F63 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC97Q96F63 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC97Q96F63 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC97Q96F63 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC97Q96F63 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC97Q96F63 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC97Q96F63 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC97Q96F63 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC97Q96F63 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC97Q96F63 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC97Q96F63 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC97Q96F63 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC97Q96F63 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC97Q96F63 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms