Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 TSPY5P-201ENST00000426936 936 ntBASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 AC100803.2-201ENST00000562459 1963 ntBASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHBDF1Q96CC6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 LINC00896-202ENST00000609602 2128 ntBASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 RNF152P1-201ENST00000397754 604 ntBASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 AC092597.1-201ENST00000487352 616 ntBASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHBDF1Q96CC6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 AC022898.2-201ENST00000616822 1312 ntBASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 KRT18P38-201ENST00000449496 1282 ntBASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHBDF1Q96CC6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RHBDF1Q96CC6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms