Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.36■□□□□ 0.37
UBE2E3Q969T4 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.36■□□□□ 0.37
UBE2E3Q969T4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 LINC00167-201ENST00000530583 1419 ntBASIC17.36■□□□□ 0.37
UBE2E3Q969T4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UBE2E3Q969T4 AC132938.6-201ENST00000623828 1655 ntBASIC17.36■□□□□ 0.37
UBE2E3Q969T4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 AC018470.1-201ENST00000624790 3129 ntBASIC17.35■□□□□ 0.37
UBE2E3Q969T4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 ZNF444P1-201ENST00000559497 298 ntBASIC17.35■□□□□ 0.37
UBE2E3Q969T4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 LINC00602-201ENST00000629776 2065 ntBASIC17.35■□□□□ 0.37
UBE2E3Q969T4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
UBE2E3Q969T4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 KRT18P65-201ENST00000439811 1286 ntBASIC17.34■□□□□ 0.37
UBE2E3Q969T4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 AC063952.2-201ENST00000498792 1227 ntBASIC17.34■□□□□ 0.37
UBE2E3Q969T4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2E3Q969T4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms