Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.53■□□□□ 0.24
HPS1Q92902 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.53■□□□□ 0.24
HPS1Q92902 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.53■□□□□ 0.24
HPS1Q92902 AC012306.2-201ENST00000609350 630 ntBASIC16.53■□□□□ 0.24
HPS1Q92902 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HPS1Q92902 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HPS1Q92902 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.53■□□□□ 0.24
HPS1Q92902 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HPS1Q92902 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.53■□□□□ 0.24
HPS1Q92902 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HPS1Q92902 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HPS1Q92902 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
HPS1Q92902 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HPS1Q92902 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HPS1Q92902 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.52■□□□□ 0.24
HPS1Q92902 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HPS1Q92902 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.52■□□□□ 0.24
HPS1Q92902 OR6D1P-203ENST00000641209 4860 ntBASIC16.52■□□□□ 0.24
HPS1Q92902 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HPS1Q92902 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
HPS1Q92902 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HPS1Q92902 MMP23A-201ENST00000234610 1017 ntBASIC16.52■□□□□ 0.24
HPS1Q92902 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.52■□□□□ 0.24
HPS1Q92902 KRT18P16-201ENST00000510337 1294 ntBASIC16.52■□□□□ 0.24
HPS1Q92902 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC16.52■□□□□ 0.24
HPS1Q92902 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.52■□□□□ 0.24
HPS1Q92902 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
HPS1Q92902 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
HPS1Q92902 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HPS1Q92902 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
HPS1Q92902 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.52■□□□□ 0.23
HPS1Q92902 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HPS1Q92902 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.52■□□□□ 0.23
HPS1Q92902 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HPS1Q92902 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
HPS1Q92902 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HPS1Q92902 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.52■□□□□ 0.23
HPS1Q92902 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
HPS1Q92902 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HPS1Q92902 AC008741.2-201ENST00000612792 3115 ntBASIC16.52■□□□□ 0.23
HPS1Q92902 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HPS1Q92902 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HPS1Q92902 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HPS1Q92902 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HPS1Q92902 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HPS1Q92902 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 FAM197Y1-201ENST00000421178 764 ntBASIC16.51■□□□□ 0.23
HPS1Q92902 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.51■□□□□ 0.23
HPS1Q92902 TSPY15P-201ENST00000457163 923 ntBASIC16.51■□□□□ 0.23
HPS1Q92902 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.51■□□□□ 0.23
HPS1Q92902 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.51■□□□□ 0.23
HPS1Q92902 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.51■□□□□ 0.23
HPS1Q92902 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.51■□□□□ 0.23
HPS1Q92902 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.51■□□□□ 0.23
HPS1Q92902 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.51■□□□□ 0.23
HPS1Q92902 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
HPS1Q92902 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
HPS1Q92902 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.51■□□□□ 0.23
HPS1Q92902 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HPS1Q92902 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HPS1Q92902 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HPS1Q92902 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.51■□□□□ 0.23
HPS1Q92902 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HPS1Q92902 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.51■□□□□ 0.23
HPS1Q92902 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS1Q92902 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.5■□□□□ 0.23
HPS1Q92902 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS1Q92902 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS1Q92902 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.5■□□□□ 0.23
HPS1Q92902 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HPS1Q92902 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS1Q92902 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS1Q92902 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS1Q92902 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS1Q92902 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.5■□□□□ 0.23
HPS1Q92902 KSR1P1-201ENST00000446298 240 ntBASIC16.5■□□□□ 0.23
HPS1Q92902 NUDT16P1-203ENST00000513809 620 ntBASIC16.5■□□□□ 0.23
HPS1Q92902 KRT18P21-201ENST00000515767 1272 ntBASIC16.5■□□□□ 0.23
HPS1Q92902 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
HPS1Q92902 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms