Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP6NLQ92738 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP6NLQ92738 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.34■□□□□ 0.85
USP6NLQ92738 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.34■□□□□ 0.85
USP6NLQ92738 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP6NLQ92738 AC005332.7-201ENST00000614046 2005 ntBASIC20.34■□□□□ 0.85
USP6NLQ92738 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6NLQ92738 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6NLQ92738 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP6NLQ92738 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.34■□□□□ 0.85
USP6NLQ92738 AP006288.1-201ENST00000446065 395 ntBASIC20.34■□□□□ 0.85
USP6NLQ92738 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP6NLQ92738 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
USP6NLQ92738 AD001527.2-201ENST00000622994 785 ntBASIC20.34■□□□□ 0.85
USP6NLQ92738 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
USP6NLQ92738 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6NLQ92738 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.34■□□□□ 0.85
USP6NLQ92738 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.34■□□□□ 0.85
USP6NLQ92738 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6NLQ92738 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.34■□□□□ 0.85
USP6NLQ92738 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6NLQ92738 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP6NLQ92738 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
USP6NLQ92738 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP6NLQ92738 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP6NLQ92738 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP6NLQ92738 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
USP6NLQ92738 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.33■□□□□ 0.85
USP6NLQ92738 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP6NLQ92738 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP6NLQ92738 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP6NLQ92738 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP6NLQ92738 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP6NLQ92738 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.33■□□□□ 0.85
USP6NLQ92738 KRT18P2-201ENST00000447938 1258 ntBASIC20.33■□□□□ 0.85
USP6NLQ92738 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP6NLQ92738 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.33■□□□□ 0.85
USP6NLQ92738 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.33■□□□□ 0.85
USP6NLQ92738 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.33■□□□□ 0.85
USP6NLQ92738 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.33■□□□□ 0.85
USP6NLQ92738 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.33■□□□□ 0.85
USP6NLQ92738 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
USP6NLQ92738 AC064836.3-201ENST00000607928 673 ntBASIC20.33■□□□□ 0.85
USP6NLQ92738 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP6NLQ92738 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP6NLQ92738 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP6NLQ92738 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
USP6NLQ92738 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
USP6NLQ92738 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP6NLQ92738 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.33■□□□□ 0.84
USP6NLQ92738 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.33■□□□□ 0.84
USP6NLQ92738 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
USP6NLQ92738 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
USP6NLQ92738 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
USP6NLQ92738 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.32■□□□□ 0.84
USP6NLQ92738 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
USP6NLQ92738 AC096633.1-201ENST00000422446 749 ntBASIC20.32■□□□□ 0.84
USP6NLQ92738 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.32■□□□□ 0.84
USP6NLQ92738 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.32■□□□□ 0.84
USP6NLQ92738 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.32■□□□□ 0.84
USP6NLQ92738 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
USP6NLQ92738 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.32■□□□□ 0.84
USP6NLQ92738 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP6NLQ92738 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
USP6NLQ92738 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP6NLQ92738 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP6NLQ92738 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.31■□□□□ 0.84
USP6NLQ92738 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP6NLQ92738 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP6NLQ92738 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.31■□□□□ 0.84
USP6NLQ92738 SIGLEC16-201ENST00000599858 1437 ntBASIC20.31■□□□□ 0.84
USP6NLQ92738 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
USP6NLQ92738 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP6NLQ92738 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.31■□□□□ 0.84
USP6NLQ92738 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
USP6NLQ92738 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.31■□□□□ 0.84
USP6NLQ92738 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.31■□□□□ 0.84
USP6NLQ92738 MCCD1P2-201ENST00000423228 335 ntBASIC20.31■□□□□ 0.84
USP6NLQ92738 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.31■□□□□ 0.84
USP6NLQ92738 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.31■□□□□ 0.84
USP6NLQ92738 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.31■□□□□ 0.84
USP6NLQ92738 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.31■□□□□ 0.84
USP6NLQ92738 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.31■□□□□ 0.84
USP6NLQ92738 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
USP6NLQ92738 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.31■□□□□ 0.84
USP6NLQ92738 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.31■□□□□ 0.84
USP6NLQ92738 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms