Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC3Q92529 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC3Q92529 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.23■□□□□ 0.67
SHC3Q92529 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.23■□□□□ 0.67
SHC3Q92529 KRT8P47-201ENST00000604727 1398 ntBASIC19.23■□□□□ 0.67
SHC3Q92529 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC3Q92529 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC3Q92529 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC3Q92529 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.23■□□□□ 0.67
SHC3Q92529 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.23■□□□□ 0.67
SHC3Q92529 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.23■□□□□ 0.67
SHC3Q92529 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.23■□□□□ 0.67
SHC3Q92529 GPR32P1-201ENST00000601788 811 ntBASIC19.23■□□□□ 0.67
SHC3Q92529 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC3Q92529 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.23■□□□□ 0.67
SHC3Q92529 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHC3Q92529 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SHC3Q92529 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.23■□□□□ 0.67
SHC3Q92529 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.23■□□□□ 0.67
SHC3Q92529 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC3Q92529 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.23■□□□□ 0.67
SHC3Q92529 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SHC3Q92529 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHC3Q92529 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC3Q92529 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC3Q92529 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.22■□□□□ 0.67
SHC3Q92529 AL353692.3-201ENST00000407031 1396 ntBASIC19.22■□□□□ 0.67
SHC3Q92529 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.22■□□□□ 0.67
SHC3Q92529 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.22■□□□□ 0.67
SHC3Q92529 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC3Q92529 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC3Q92529 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC3Q92529 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC3Q92529 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC3Q92529 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.22■□□□□ 0.67
SHC3Q92529 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.22■□□□□ 0.67
SHC3Q92529 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC3Q92529 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.22■□□□□ 0.67
SHC3Q92529 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.22■□□□□ 0.67
SHC3Q92529 RNF126P1-202ENST00000569893 925 ntBASIC19.22■□□□□ 0.67
SHC3Q92529 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHC3Q92529 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.22■□□□□ 0.67
SHC3Q92529 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.22■□□□□ 0.67
SHC3Q92529 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHC3Q92529 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.22■□□□□ 0.67
SHC3Q92529 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SHC3Q92529 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
SHC3Q92529 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC3Q92529 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC3Q92529 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SHC3Q92529 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC3Q92529 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC3Q92529 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.21■□□□□ 0.67
SHC3Q92529 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.21■□□□□ 0.67
SHC3Q92529 TSPY12P-201ENST00000421279 868 ntBASIC19.21■□□□□ 0.67
SHC3Q92529 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.21■□□□□ 0.67
SHC3Q92529 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC3Q92529 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC3Q92529 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.21■□□□□ 0.67
SHC3Q92529 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC3Q92529 AL390719.2-201ENST00000606993 987 ntBASIC19.21■□□□□ 0.67
SHC3Q92529 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.21■□□□□ 0.67
SHC3Q92529 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC3Q92529 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC3Q92529 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC3Q92529 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC3Q92529 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SHC3Q92529 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC3Q92529 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC3Q92529 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SHC3Q92529 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SHC3Q92529 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.2■□□□□ 0.66
SHC3Q92529 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.2■□□□□ 0.66
SHC3Q92529 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.2■□□□□ 0.66
SHC3Q92529 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.2■□□□□ 0.66
SHC3Q92529 AL671277.2-201ENST00000458060 996 ntBASIC19.2■□□□□ 0.66
SHC3Q92529 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.2■□□□□ 0.66
SHC3Q92529 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.2■□□□□ 0.66
SHC3Q92529 AC005332.3-201ENST00000589904 676 ntBASIC19.2■□□□□ 0.66
SHC3Q92529 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.2■□□□□ 0.66
SHC3Q92529 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SHC3Q92529 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.2■□□□□ 0.66
SHC3Q92529 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms