Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 INIP-202ENST00000374236 874 ntTSL 2 BASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 ELK2BP-201ENST00000415014 1224 ntBASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 AC006557.2-201ENST00000592985 1240 ntBASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC27.84■■■□□ 2.05
CASKIN1Q8WXD9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 SIRPAP1-201ENST00000448467 1770 ntBASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC27.83■■■□□ 2.05
CASKIN1Q8WXD9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.04
CASKIN1Q8WXD9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC27.83■■■□□ 2.04
CASKIN1Q8WXD9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 AC004817.3-201ENST00000602957 2129 ntBASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 AC092865.5-201ENST00000545435 363 ntBASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
CASKIN1Q8WXD9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CASKIN1Q8WXD9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
CASKIN1Q8WXD9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CASKIN1Q8WXD9 AP000974.1-201ENST00000623909 2387 ntBASIC27.8■■■□□ 2.04
CASKIN1Q8WXD9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CASKIN1Q8WXD9 KLF4P1-201ENST00000412782 1185 ntBASIC27.8■■■□□ 2.04
CASKIN1Q8WXD9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC27.8■■■□□ 2.04
CASKIN1Q8WXD9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC27.8■■■□□ 2.04
CASKIN1Q8WXD9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC27.8■■■□□ 2.04
CASKIN1Q8WXD9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CASKIN1Q8WXD9 FUT8-AS1-201ENST00000621019 1521 ntBASIC27.8■■■□□ 2.04
CASKIN1Q8WXD9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
CASKIN1Q8WXD9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CASKIN1Q8WXD9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CASKIN1Q8WXD9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 DDX43P3-201ENST00000441064 443 ntBASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 AL589182.2-201ENST00000619332 1049 ntBASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CASKIN1Q8WXD9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC27.79■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms