Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 HCG4P8-203ENST00000443049 980 ntBASIC18.93■□□□□ 0.62
RNF139Q8WU17 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF139Q8WU17 AC092119.3-201ENST00000612618 583 ntBASIC18.93■□□□□ 0.62
RNF139Q8WU17 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF139Q8WU17 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RNF139Q8WU17 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF139Q8WU17 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RNF139Q8WU17 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF139Q8WU17 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF139Q8WU17 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 PHGDH-209ENST00000641074 1780 ntBASIC18.92■□□□□ 0.62
RNF139Q8WU17 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 AP002414.4-201ENST00000589764 1148 ntBASIC18.92■□□□□ 0.62
RNF139Q8WU17 AC092329.2-201ENST00000598402 547 ntBASIC18.92■□□□□ 0.62
RNF139Q8WU17 NPAP1P7-201ENST00000613027 823 ntBASIC18.92■□□□□ 0.62
RNF139Q8WU17 AC124864.1-201ENST00000623408 392 ntBASIC18.92■□□□□ 0.62
RNF139Q8WU17 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.92■□□□□ 0.62
RNF139Q8WU17 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF139Q8WU17 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF139Q8WU17 AC007613.1-201ENST00000572811 2597 ntBASIC18.91■□□□□ 0.62
RNF139Q8WU17 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RNF139Q8WU17 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 AP002383.4-201ENST00000442518 975 ntBASIC18.91■□□□□ 0.62
RNF139Q8WU17 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
RNF139Q8WU17 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF139Q8WU17 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF139Q8WU17 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF139Q8WU17 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF139Q8WU17 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF139Q8WU17 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RNF139Q8WU17 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF139Q8WU17 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 OR6D1P-202ENST00000641007 5290 ntBASIC18.9■□□□□ 0.62
RNF139Q8WU17 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF139Q8WU17 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
RNF139Q8WU17 AL592071.1-201ENST00000611956 408 ntBASIC18.9■□□□□ 0.62
RNF139Q8WU17 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF139Q8WU17 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms