Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 AL138831.2-201ENST00000606564 490 ntBASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF2Q8TEC5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 HLA-A-201ENST00000376802 1334 ntBASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 AC125634.1-201ENST00000438758 1403 ntBASIC18.66■□□□□ 0.58
SH3RF2Q8TEC5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 FAM197Y8-203ENST00000450145 560 ntBASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 AC008608.2-201ENST00000606089 416 ntBASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3RF2Q8TEC5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SH3RF2Q8TEC5 ESPNP-201ENST00000270691 2015 ntBASIC18.64■□□□□ 0.58
SH3RF2Q8TEC5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SH3RF2Q8TEC5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 AL022342.1-201ENST00000400363 863 ntBASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 AC112698.1-201ENST00000510299 916 ntBASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms