Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.17■□□□□ 0.5
CHD5Q8TDI0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 AC097374.2-201ENST00000618617 1306 ntBASIC18.17■□□□□ 0.5
CHD5Q8TDI0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 SLC25A6P5-201ENST00000435663 894 ntBASIC18.17■□□□□ 0.5
CHD5Q8TDI0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD5Q8TDI0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 KRT18P31-201ENST00000506277 1292 ntBASIC18.16■□□□□ 0.5
CHD5Q8TDI0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHD5Q8TDI0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 PRELID1P1-202ENST00000567272 903 ntBASIC18.15■□□□□ 0.5
CHD5Q8TDI0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 AC005104.2-201ENST00000427818 678 ntBASIC18.15■□□□□ 0.5
CHD5Q8TDI0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 AC011467.2-201ENST00000598425 242 ntBASIC18.15■□□□□ 0.5
CHD5Q8TDI0 REXO1L6P-202ENST00000619970 1078 ntBASIC18.15■□□□□ 0.5
CHD5Q8TDI0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CHD5Q8TDI0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CHD5Q8TDI0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.14■□□□□ 0.5
CHD5Q8TDI0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CHD5Q8TDI0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.14■□□□□ 0.49
CHD5Q8TDI0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD5Q8TDI0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.14■□□□□ 0.49
CHD5Q8TDI0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.14■□□□□ 0.49
CHD5Q8TDI0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHD5Q8TDI0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD5Q8TDI0 AL450487.1-201ENST00000426799 995 ntBASIC18.14■□□□□ 0.49
CHD5Q8TDI0 AC079781.3-201ENST00000449110 356 ntBASIC18.14■□□□□ 0.49
CHD5Q8TDI0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.14■□□□□ 0.49
CHD5Q8TDI0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms