Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 AC004835.2-201ENST00000603762 682 ntBASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 RN7SL204P-201ENST00000582831 262 ntBASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 AC009093.7-201ENST00000623853 1223 ntBASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 AC008761.3-201ENST00000624803 892 ntBASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 TSPY16P-201ENST00000449843 468 ntBASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 AL499627.1-201ENST00000569373 2188 ntBASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 AC236430.1-201ENST00000402231 743 ntBASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 DUX4L17-201ENST00000557360 1267 ntBASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ALMS1Q8TCU4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 AC074386.1-202ENST00000463561 864 ntBASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 AP005018.1-201ENST00000525475 301 ntBASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 MYLKP1-201ENST00000509077 1580 ntBASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms