Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 AC018445.3-201ENST00000624177 1945 ntBASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 FP475955.4-201ENST00000623131 1990 ntBASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.96■□□□□ 0.3
SNIP1Q8TAD8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNIP1Q8TAD8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.96■□□□□ 0.3
SNIP1Q8TAD8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNIP1Q8TAD8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
SNIP1Q8TAD8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.96■□□□□ 0.3
SNIP1Q8TAD8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.96■□□□□ 0.3
SNIP1Q8TAD8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.96■□□□□ 0.3
SNIP1Q8TAD8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNIP1Q8TAD8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 AC112907.3-201ENST00000577781 2400 ntBASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 MIR1199-201ENST00000621445 119 ntBASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNIP1Q8TAD8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 AL645939.2-201ENST00000427340 991 ntBASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 AC120057.1-201ENST00000483947 663 ntBASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms