Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 EXD2-204ENST00000409242 2496 ntTSL 2 BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 AC097534.2-203ENST00000609900 1921 ntBASIC11.24□□□□□ -0.61
SVIPQ8NHG7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 AC145285.7-201ENST00000614819 1539 ntBASIC11.24□□□□□ -0.61
SVIPQ8NHG7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SVIPQ8NHG7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 ADAMTSL1-201ENST00000276935 2906 ntTSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 EFTUD1P1-204ENST00000560401 1798 ntBASIC11.23□□□□□ -0.61
SVIPQ8NHG7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 PI4KAP2-201ENST00000360806 2080 ntBASIC11.23□□□□□ -0.61
SVIPQ8NHG7 ADAM28-202ENST00000437154 2085 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SVIPQ8NHG7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SVIPQ8NHG7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms