Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.35■□□□□ 0.69
BEST2Q8NFU1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 KRT18P31-201ENST00000506277 1292 ntBASIC19.34■□□□□ 0.69
BEST2Q8NFU1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.34■□□□□ 0.69
BEST2Q8NFU1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST2Q8NFU1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
BEST2Q8NFU1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 NUS1P2-201ENST00000417358 873 ntBASIC19.33■□□□□ 0.68
BEST2Q8NFU1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 AC096582.2-201ENST00000510860 516 ntBASIC19.33■□□□□ 0.68
BEST2Q8NFU1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 AC009533.2-201ENST00000543664 586 ntBASIC19.33■□□□□ 0.68
BEST2Q8NFU1 BNIP3P18-201ENST00000593976 575 ntBASIC19.33■□□□□ 0.68
BEST2Q8NFU1 LINC01711-201ENST00000598340 967 ntBASIC19.33■□□□□ 0.68
BEST2Q8NFU1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 AL732292.2-201ENST00000609649 430 ntBASIC19.33■□□□□ 0.68
BEST2Q8NFU1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 AC125634.1-201ENST00000438758 1403 ntBASIC19.33■□□□□ 0.68
BEST2Q8NFU1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
BEST2Q8NFU1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST2Q8NFU1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST2Q8NFU1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms