Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SETD9Q8NE22 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SETD9Q8NE22 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SETD9Q8NE22 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SETD9Q8NE22 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.57■□□□□ 0.24
SETD9Q8NE22 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SETD9Q8NE22 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SETD9Q8NE22 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SETD9Q8NE22 AC009102.3-201ENST00000623118 1491 ntBASIC16.57■□□□□ 0.24
SETD9Q8NE22 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SETD9Q8NE22 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SETD9Q8NE22 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SETD9Q8NE22 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
SETD9Q8NE22 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.57■□□□□ 0.24
SETD9Q8NE22 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.57■□□□□ 0.24
SETD9Q8NE22 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SETD9Q8NE22 AC131212.4-201ENST00000623606 975 ntBASIC16.57■□□□□ 0.24
SETD9Q8NE22 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SETD9Q8NE22 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.57■□□□□ 0.24
SETD9Q8NE22 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SETD9Q8NE22 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
SETD9Q8NE22 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.57■□□□□ 0.24
SETD9Q8NE22 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.57■□□□□ 0.24
SETD9Q8NE22 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SETD9Q8NE22 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SETD9Q8NE22 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.57■□□□□ 0.24
SETD9Q8NE22 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.57■□□□□ 0.24
SETD9Q8NE22 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.56■□□□□ 0.24
SETD9Q8NE22 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SETD9Q8NE22 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.56■□□□□ 0.24
SETD9Q8NE22 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
SETD9Q8NE22 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.56■□□□□ 0.24
SETD9Q8NE22 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 MIR149-201ENST00000384879 89 ntBASIC16.56■□□□□ 0.24
SETD9Q8NE22 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.56■□□□□ 0.24
SETD9Q8NE22 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.56■□□□□ 0.24
SETD9Q8NE22 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.56■□□□□ 0.24
SETD9Q8NE22 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.56■□□□□ 0.24
SETD9Q8NE22 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.56■□□□□ 0.24
SETD9Q8NE22 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SETD9Q8NE22 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.56■□□□□ 0.24
SETD9Q8NE22 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 SDHAP2-201ENST00000455183 2001 ntBASIC16.55■□□□□ 0.24
SETD9Q8NE22 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SETD9Q8NE22 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SETD9Q8NE22 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms